Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rnf26Ring finger protein 26. (473 aa)    
Predicted Functional Partners:
TMEM43
Transmembrane protein 43.
    
 
 0.876
tollip
Toll interacting protein.
    
 
 0.875
tax1bp1
Tax1 binding protein 1.
    
 
 0.819
sqstm1
Sequestosome 1.
    
 
 0.799
sting1
Stimulator of interferon response cGAMP interactor 1.
    
 
 0.799
ENSBSLP00000004541
Ribosomal protein S25.
      
 0.768
cuedc2
CUE domain containing 2.
    
   0.733
tmem33
Transmembrane protein 33.
    
 
 0.729
slc37a4
Solute carrier family 37 member 4.
      
 0.711
rnf115
Ring finger protein 115.
     
 0.701
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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