STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000010509Noggin 1. (217 aa)    
Predicted Functional Partners:
bmp4
Bone morphogenetic protein 4.
    
 0.957
LOC114867783
Bone morphogenetic protein 2-like.
    
 0.951
bmp2
Bone morphogenetic protein 2.
    
 0.951
bmp6
Bone morphogenetic protein 6.
    
 0.947
LOC114858325
Bone morphogenetic protein 7-like.
    
 0.947
bmp5
Bone morphogenetic protein 5.
    
 0.947
LOC114856062
Bone morphogenetic protein 7-like.
    
 0.944
LOC114848498
Growth/differentiation factor 6-A-like.
    
 0.937
LOC114846039
Bone morphogenetic protein 2-like.
    
  0.879
gdf6
Growth differentiation factor 6.
    
  0.879
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.