STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114862647Src substrate cortactin-like. (491 aa)    
Predicted Functional Partners:
gosr1
Golgi SNAP receptor complex member 1.
   
 0.920
stx5
Syntaxin 5.
    
 0.919
LOC114842713
Actin-related protein 2-like.
   
 0.917
actr2
Actin related protein 2.
   
 0.917
was
WASP actin nucleation promoting factor.
   
 0.914
LOC114857079
Tight junction protein ZO-1-like.
    
 0.902
LOC114851841
Tight junction protein ZO-1-like.
    
 0.902
uso1
USO1 vesicle transport factor.
   
 0.897
golga2
Golgin A2.
   
 
 0.884
WHAMM
WASP homolog associated with actin, golgi membranes and microtubules.
   
 0.881
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.