STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llphLLP homolog, long-term synaptic facilitation factor. (126 aa)    
Predicted Functional Partners:
RPL7A
Ribosomal protein L7a.
   
   0.875
rpl30
Ribosomal protein L30.
    
   0.875
ccdc59
Coiled-coil domain containing 59.
   
    0.870
rpl11
Ribosomal protein L11.
   
   0.855
rpl14
Ribosomal protein L14.
    
   0.852
rpl37a
Ribosomal protein L37a.
    
   0.851
rpl31
Ribosomal protein L31.
    
   0.850
rpl15
Ribosomal protein L15.
    
   0.850
LOC114857279
60S ribosomal protein L4-A-like.
    
   0.850
nhp2
NHP2 ribonucleoprotein.
   
   0.836
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.