STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thnsl2Threonine synthase like 2. (485 aa)    
Predicted Functional Partners:
psat1
Phosphoserine aminotransferase 1.
  
 0.935
psph
Phosphoserine phosphatase.
  
 0.924
SDS
Serine dehydratase.
  
 
 0.922
LOC114845807
Probable low-specificity L-threonine aldolase 2.
  
 0.919
cth
Cystathionine gamma-lyase.
  
 
 0.908
LOC114863082
L-threonine dehydratase biosynthetic IlvA-like.
  
 
 0.904
LOC114842174
L-threonine ammonia-lyase-like.
  
 
 0.904
oat
Ornithine aminotransferase.
  
 
 0.891
ugcg
UDP-glucose ceramide glucosyltransferase.
  
 
 0.863
hddc3
HD domain containing 3.
  
 
 0.860
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.