Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114846784Corepressor interacting with RBPJ 1-like. (461 aa)    
Predicted Functional Partners:
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.983
LOC114848343
Recombining binding protein suppressor of hairless-like.
    
 0.983
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.959
nkap
NFKB activating protein.
   
 
 0.950
cwc25
CWC25 spliceosome associated protein homolog.
   
 
 0.915
ncor2
Nuclear receptor corepressor 2.
    
 0.874
HDAC2
Histone deacetylase 2.
    
 0.835
LOC114865711
Probable histone deacetylase 1-B.
    
 0.835
LOC114848179
Probable histone deacetylase 1-B.
    
 0.835
snw1
SNW domain containing 1.
   
 
 0.764
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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