Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
armc2Armadillo repeat containing 2. (813 aa)    
Predicted Functional Partners:
WDR63
WD repeat domain 63.
      
 0.851
nt5dc1
5'-nucleotidase domain containing 1.
      
 0.769
cep78
Centrosomal protein 78.
      
 0.726
LOC114868538
Tetratricopeptide repeat protein 29-like.
      
 0.715
cfap58
Cilia and flagella associated protein 58.
      
 0.699
spef2
Sperm flagellar 2.
   
 
 0.699
ENSBSLP00000024729
annotation not available
   
 0.693
cdt1
Chromatin licensing and DNA replication factor 1.
      
 0.674
ARMC6
Armadillo repeat containing 6.
      
 0.670
LOC114860046
Glutamine-rich protein 2-like.
    
 0.668
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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