STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114864806Neuronal acetylcholine receptor subunit alpha-7-like. (534 aa)    
Predicted Functional Partners:
LOC114866502
Glutamate receptor ionotropic, NMDA 1.
     
 0.831
p2rx1
Purinergic receptor P2X 1.
     
 0.800
LOC114851812
Neuronal acetylcholine receptor subunit alpha-7-like.
  
  
 
0.792
LOC114859869
Neuronal acetylcholine receptor subunit alpha-7-like.
  
  
 
0.791
grin2c
Glutamate ionotropic receptor NMDA type subunit 2C.
     
 0.791
grin2a
Glutamate ionotropic receptor NMDA type subunit 2A.
     
 0.791
GRIN2C
Glutamate receptor ionotropic, NMDA 2C-like.
     
 0.791
chrna1
Cholinergic receptor nicotinic alpha 1 subunit.
  
 
0.784
p2rx5
Purinergic receptor P2X 5.
     
 0.684
LOC114851176
Neuronal acetylcholine receptor subunit alpha-2-like.
  
0.675
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.