STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traf3TNF receptor associated factor 3. (595 aa)    
Predicted Functional Partners:
LOC114848314
Flocculation protein FLO11-like.
    
 0.984
LOC114858865
Tumor necrosis factor receptor superfamily member 5-like.
   
 0.983
traf6
TNF receptor associated factor 6.
   
0.982
tank
TRAF family member associated NFKB activator.
    
 0.982
ENSBSLP00000004992
TANK-binding kinase 1.
   
 0.961
tradd
TNFRSF1A associated via death domain.
    
 0.956
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.955
tnfrsf1a
TNF receptor superfamily member 1A.
    
 0.925
LOC114855411
Tumor necrosis factor receptor superfamily member 3-like.
    
 0.921
LOC114842952
Tumor necrosis factor receptor superfamily member 5-like.
    
 0.921
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.