Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ube2g2Ubiquitin conjugating enzyme E2 G2. (165 aa)    
Predicted Functional Partners:
aup1
AUP1 lipid droplet regulating VLDL assembly factor.
    
 
 0.990
prkn
Parkin RBR E3 ubiquitin protein ligase.
    
   0.974
ENSBSLP00000037601
Ubiquitin B.
    
 0.964
ube2j2
Ubiquitin conjugating enzyme E2 J2.
   
 0.959
LOC114860326
E3 ubiquitin-protein ligase RBX1.
    
 0.952
RBX1
E3 ubiquitin-protein ligase RBX1-like.
    
 0.952
MARCHF6
Membrane associated ring-CH-type finger 6.
    
 
 0.941
LOC114844259
E3 ubiquitin-protein ligase MARCH6-like.
    
 
 0.941
c1qtnf12
C1q and TNF related 12.
   
 0.939
syvn1
Synoviolin 1.
    
 
 0.936
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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