STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phf19PHD finger protein 19. (609 aa)    
Predicted Functional Partners:
eed
Embryonic ectoderm development.
   
 0.966
kdm6b
Lysine demethylase 6B.
    
 0.931
LOC114866962
Histone demethylase UTY-like.
    
 0.931
ENSBSLP00000001662
annotation not available
    
 0.931
jarid2
Jumonji and AT-rich interaction domain containing 2.
    
 0.931
kdm6a
Lysine demethylase 6A.
    
 0.931
LOC114870008
Uncharacterized LOC114870008.
    
 0.931
ints1
Integrator complex subunit 1.
    
 0.930
ints3
Integrator complex subunit 3.
    
 0.923
LOC114860513
Polycomb protein suz12-B-like.
   
 0.914
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.