STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctnna1Catenin alpha 1. (941 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta 1.
   
 0.980
LOC114841762
Adenosine kinase-like.
    
0.966
vcl
Vinculin.
    
0.966
tlnrd1
Talin rod domain containing 1.
   
 0.964
LOC114865743
Catenin beta-1-like.
   
 0.954
LOC114856819
Junction plakoglobin-like.
   
 0.953
jup
Junction plakoglobin.
   
 0.946
LOC114849151
Afadin-like.
    
 0.910
cdh5
Cadherin 5.
    
 0.880
LOC114857079
Tight junction protein ZO-1-like.
   
 0.877
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.