Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
strn3Striatin 3. (723 aa)    
Predicted Functional Partners:
mob4
MOB family member 4, phocein.
   
 
 0.896
strip1
Striatin interacting protein 1.
    
 
 0.892
ENSBSLP00000017055
annotation not available
   
 
 0.876
LOC114867941
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
 
 0.868
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.866
strip2
Striatin interacting protein 2.
    
 
 0.864
slmap
Sarcolemma associated protein.
   
 
 0.856
suox
Sulfite oxidase.
    
   0.836
LOC114858992
CTTNBP2 N-terminal-like protein.
   
 
 0.827
cttnbp2nl
CTTNBP2 N-terminal like.
   
 
 0.827
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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