STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itih3Inter-alpha-trypsin inhibitor heavy chain 3. (915 aa)    
Predicted Functional Partners:
coq3
Coenzyme Q3, methyltransferase.
   
 0.889
fech
Ferrochelatase.
    
 0.846
sord
Sorbitol dehydrogenase.
  
 
 0.834
ppox
Protoporphyrinogen oxidase.
  
 
 0.802
NT5E
5'-nucleotidase-like.
    
 0.762
gmps
Guanine monophosphate synthase.
    
  0.750
cenpv
Centromere protein V.
    
  0.741
rnls
Renalase, FAD dependent amine oxidase.
    
  0.677
ephx2
Epoxide hydrolase 2.
  
 
 0.651
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
    
  0.649
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.