STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bbxBBX high mobility group box domain containing. (608 aa)    
Predicted Functional Partners:
LOC114858286
Uncharacterized LOC114858286.
    
 
 0.638
atxn1l
Ataxin 1 like.
    
 
 0.638
LOC114856061
Uncharacterized LOC114856061.
    
 
 0.638
ENSBSLP00000029869
Ataxin 1b.
    
 
 0.638
atxn1
Ataxin 1.
    
 
 0.638
KIF18A
Kinesin family member 18A.
  
   
 0.603
sin3b
SIN3 transcription regulator family member B.
   
 
 0.565
LOC114851916
Paired amphipathic helix protein Sin3a-like.
   
 
 0.565
sin3a
SIN3 transcription regulator family member A.
   
 
 0.565
bbox1
Gamma-butyrobetaine hydroxylase 1.
      
 0.514
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.