STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amdhd1Amidohydrolase domain containing 1. (432 aa)    
Predicted Functional Partners:
ftcd
Formimidoyltransferase cyclodeaminase.
 
 
 0.966
hal
Histidine ammonia-lyase.
 
 
 0.965
uroc1
MAP kinase-activated protein kinase 2-like.
  
 
 0.957
uprt
Uracil phosphoribosyltransferase homolog.
  
 
 0.928
aox1
Aldehyde oxidase 1.
  
 
 0.897
LOC114856235
Zinc finger protein ZXDC-like.
   
 
 0.896
TYMP
Thymidine phosphorylase.
    
 0.896
dhodh
Dihydroorotate dehydrogenase (quinone).
  
 
 0.869
agmat
Agmatinase.
  
 
 0.860
dpyd
Dihydropyrimidine dehydrogenase.
  
 
 0.857
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.