Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000011544annotation not available (239 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.788
ndufs6
NADH:ubiquinone oxidoreductase subunit S6.
    
   0.723
ndufa12
NADH:ubiquinone oxidoreductase subunit A12.
    
   0.691
grxcr1
Glutaredoxin and cysteine rich domain containing 1.
     
 0.613
LOC114846828
ranBP2-like and GRIP domain-containing protein 3.
    
  0.613
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.572
LOC114842188
Tumor necrosis factor receptor superfamily member 6-like.
    
  0.546
LOC114862291
Protein HIRA.
    
 0.542
ENSBSLP00000002158
Ubinuclein 1.
    
 0.541
nup214
Nucleoporin 214.
    
 0.511
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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