Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ism2Isthmin 2. (467 aa)    
Predicted Functional Partners:
sptlc1
Serine palmitoyltransferase long chain base subunit 1.
   
 0.958
LOC114870517
Uncharacterized LOC114870517.
      
 0.838
kdsr
3-ketodihydrosphingosine reductase.
     
 0.828
sptssa
Serine palmitoyltransferase small subunit A.
    
 0.799
sord
Sorbitol dehydrogenase.
  
 
 0.774
ccdc85c
Coiled-coil domain containing 85C.
      
 0.714
dhps
Deoxyhypusine synthase.
  
  
 0.700
CCNK
Cyclin K.
      
 0.699
alad
Aminolevulinate dehydratase.
    
 0.687
tasp1
Taspase 1.
      
 0.677
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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