Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
marcksMyristoylated alanine rich protein kinase C substrate. (258 aa)    
Predicted Functional Partners:
calm3
Calmodulin 3.
    
 0.784
LOC114849035
Calmodulin.
    
 0.784
LOC114849214
Calmodulin.
    
 0.784
basp1
Brain abundant membrane attached signal protein 1.
   
 0.744
LOC114865882
MARCKS-related protein 1-B-like.
   
  
 0.716
calm2
Calmodulin 2.
    
 0.690
PRKCB
Protein kinase C beta.
    
 0.653
LOC114860469
Protein kinase C alpha type-like.
    
 0.653
LOC114843025
Protein kinase C alpha type-like.
    
 0.653
LOC114846545
Protein kinase C alpha type.
    
 0.653
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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