Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
LOC114866081Glutamate receptor ionotropic, kainate 5-like. (1123 aa)    
Predicted Functional Partners:
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
   
   0.670
ENSBSLP00000048337
annotation not available
   
   0.601
LOC114869650
Glutamate receptor ionotropic, kainate 1-like.
    
 0.592
LOC114849248
Glutamate receptor ionotropic, kainate 2-like.
    
 0.592
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
    
 0.592
grik1
Glutamate ionotropic receptor kainate type subunit 1.
    
 0.592
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
    
 0.592
ccdc113
Coiled-coil domain containing 113.
   
 
 0.543
cfap44
Cilia and flagella associated protein 44.
    
   0.533
pacrg
Parkin coregulated.
    
   0.530
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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