nle1 protein (Betta splendens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

nle1

Notchless homolog 1. (483 aa)

Predicted Functional Partners:

nsa2

0.993

gtpbp4

0.992

sdad1

0.991

rpf2

0.990

wdr18

0.990

gnl2

0.990

mrto4

0.986

rsl24d1

0.985

rrs1

0.985

rsl1d1

0.982

Your Current Organism:

Betta splendens

NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
gnl2	gtpbp4	ENSBSLP00000044688	ENSBSLP00000027511	G protein nucleolar 2.	GTP binding protein 4.	0.997
gnl2	mrto4	ENSBSLP00000044688	ENSBSLP00000049861	G protein nucleolar 2.	MRT4 homolog, ribosome maturation factor.	0.994
gnl2	nle1	ENSBSLP00000044688	ENSBSLP00000011752	G protein nucleolar 2.	Notchless homolog 1.	0.990
gnl2	nsa2	ENSBSLP00000044688	ENSBSLP00000029044	G protein nucleolar 2.	NSA2 ribosome biogenesis factor.	0.998
gnl2	rpf2	ENSBSLP00000044688	ENSBSLP00000017775	G protein nucleolar 2.	Ribosome production factor 2 homolog.	0.995
gnl2	rrs1	ENSBSLP00000044688	ENSBSLP00000046997	G protein nucleolar 2.	Ribosome biogenesis regulator 1 homolog.	0.985
gnl2	rsl1d1	ENSBSLP00000044688	ENSBSLP00000036953	G protein nucleolar 2.	Ribosomal L1 domain containing 1.	0.991
gnl2	rsl24d1	ENSBSLP00000044688	ENSBSLP00000011728	G protein nucleolar 2.	Ribosomal L24 domain containing 1.	0.995
gnl2	sdad1	ENSBSLP00000044688	ENSBSLP00000020491	G protein nucleolar 2.	SDA1 domain containing 1.	0.993
gnl2	wdr18	ENSBSLP00000044688	ENSBSLP00000018427	G protein nucleolar 2.	WD repeat domain 18.	0.993
gtpbp4	gnl2	ENSBSLP00000027511	ENSBSLP00000044688	GTP binding protein 4.	G protein nucleolar 2.	0.997
gtpbp4	mrto4	ENSBSLP00000027511	ENSBSLP00000049861	GTP binding protein 4.	MRT4 homolog, ribosome maturation factor.	0.998
gtpbp4	nle1	ENSBSLP00000027511	ENSBSLP00000011752	GTP binding protein 4.	Notchless homolog 1.	0.992
gtpbp4	nsa2	ENSBSLP00000027511	ENSBSLP00000029044	GTP binding protein 4.	NSA2 ribosome biogenesis factor.	0.999
gtpbp4	rpf2	ENSBSLP00000027511	ENSBSLP00000017775	GTP binding protein 4.	Ribosome production factor 2 homolog.	0.995
gtpbp4	rrs1	ENSBSLP00000027511	ENSBSLP00000046997	GTP binding protein 4.	Ribosome biogenesis regulator 1 homolog.	0.986
gtpbp4	rsl1d1	ENSBSLP00000027511	ENSBSLP00000036953	GTP binding protein 4.	Ribosomal L1 domain containing 1.	0.994
gtpbp4	rsl24d1	ENSBSLP00000027511	ENSBSLP00000011728	GTP binding protein 4.	Ribosomal L24 domain containing 1.	0.998
gtpbp4	sdad1	ENSBSLP00000027511	ENSBSLP00000020491	GTP binding protein 4.	SDA1 domain containing 1.	0.992
gtpbp4	wdr18	ENSBSLP00000027511	ENSBSLP00000018427	GTP binding protein 4.	WD repeat domain 18.	0.982