STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857574DNA-binding protein RFX7-like. (1493 aa)    
Predicted Functional Partners:
rfxap
Regulatory factor X associated protein.
    
 0.900
LOC114861437
Serine/threonine-protein kinase Chk2-like.
   
 0.881
rfxank
Regulatory factor X associated ankyrin containing protein.
    
 0.807
ankra2
Ankyrin repeat family A member 2.
   
 0.705
LOC114869063
Serine/threonine-protein kinase DCLK1-like.
     
 0.636
LOC114868484
Serine/threonine-protein kinase DCLK1-like.
     
 0.636
tonsl
Tonsoku like, DNA repair protein.
    
  0.605
btaf1
B-TFIID TATA-box binding protein associated factor 1.
    
   0.534
LOC114869875
Leucine repeat adapter protein 25-like.
      
 0.525
tm7sf3
Transmembrane 7 superfamily member 3.
   
  
 0.525
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.