Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cnnm2Cyclin and CBS domain divalent metal cation transport mediator 2. (855 aa)    
Predicted Functional Partners:
arl15
ADP ribosylation factor like GTPase 15.
   
 
 0.730
gmps
Guanine monophosphate synthase.
    
 0.723
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.683
LOC114863175
Transient receptor potential cation channel subfamily M member 6-like.
    
 
 0.681
ptp4a1
Protein tyrosine phosphatase 4A1.
    
 
 0.677
LOC114865849
Protein tyrosine phosphatase type IVA 2-like.
    
 
 0.677
NT5E
5'-nucleotidase-like.
    
 0.665
LOC114867093
Sulfate anion transporter 1-like.
  
 
 0.569
LOC114843595
Protein tyrosine phosphatase type IVA 3.
    
 
 0.566
gigyf2
GRB10 interacting GYF protein 2.
   
  
 0.523
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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