STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfc3h1Zinc finger C3H1-type containing. (2057 aa)    
Predicted Functional Partners:
mtrex
Mtr4 exosome RNA helicase.
    
 0.997
papolg
poly(A) polymerase gamma.
   
 0.991
exosc7
Exosome component 7.
    
 0.970
skiv2l
Ski2 like RNA helicase.
    
 0.969
ipo7
Importin 7.
    
 0.965
ipo8
Importin 8.
    
 0.965
exosc4
Exosome component 4.
    
 0.964
exosc6
Exosome component 6.
    
 0.961
exosc5
Exosome component 5.
    
 0.961
exosc10
Exosome component 10.
    
 0.960
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.