Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pole4DNA polymerase epsilon 4, accessory subunit. (129 aa)    
Predicted Functional Partners:
pole3
DNA polymerase epsilon 3, accessory subunit.
    
 0.999
ENSBSLP00000030016
Polymerase (DNA directed), epsilon.
    
 0.999
pole2
DNA polymerase epsilon 2, accessory subunit.
    
 0.999
pold1
DNA polymerase delta 1, catalytic subunit.
    
 0.984
pola1
DNA polymerase alpha 1, catalytic subunit.
    
 0.983
pold2
DNA polymerase delta 2, accessory subunit.
     
 0.975
LOC114862085
Nuclear transcription factor Y subunit beta-like.
    
 
 0.958
pold4
DNA polymerase delta 4, accessory subunit.
     
  0.942
pold3
DNA polymerase delta 3, accessory subunit.
    
 0.924
pola2
DNA polymerase alpha 2, accessory subunit.
     
 0.890
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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