Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mns1Meiosis specific nuclear structural 1. (497 aa)    
Predicted Functional Partners:
LOC114867364
Sperm-associated antigen 8-like.
   
   0.966
cfap161
Cilia and flagella associated protein 161.
   
 0.959
efhc1
EF-hand domain containing 1.
   
 
 0.958
enkur
Enkurin, TRPC channel interacting protein.
   
 
 0.958
efhb
EF-hand domain family member B.
   
 
 0.953
tekt2
Tektin 2.
   
 
 0.951
efhc2
EF-hand domain containing 2.
  
 
 0.944
cfap20
Cilia and flagella associated protein 20.
    
 
 0.942
pacrg
Parkin coregulated.
  
 
 0.935
LOC114852761
Dynein regulatory complex subunit 4-like.
  
 
 0.933
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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