STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parpbpPARP1 binding protein. (578 aa)    
Predicted Functional Partners:
syf2
SYF2 pre-mRNA splicing factor.
    
 0.874
cwc22
CWC22 spliceosome associated protein homolog.
   
 0.854
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
  
 0.840
WDR25
WD repeat domain 25.
   
 0.835
cdc40
Cell division cycle 40.
   
 0.835
nup155
Nucleoporin 155.
   
 0.818
snw1
SNW domain containing 1.
   
 0.817
prpf19
pre-mRNA processing factor 19.
    
 0.813
xab2
XPA binding protein 2.
    
 0.811
smc2
Structural maintenance of chromosomes 2.
  
  0.808
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.