Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
pmchPro-melanin concentrating hormone. (140 aa)    
Predicted Functional Partners:
LOC114862710
Melanin-concentrating hormone receptor 1-like.
    
 0.980
LOC114864752
Melanin-concentrating hormone receptor 2-like.
    
 0.972
LOC114860072
Inactive phospholipase C-like protein 2.
   
 
 0.899
hcrt
Hypocretin neuropeptide precursor.
   
 
 0.899
pomc
Proopiomelanocortin.
     
 0.795
parpbp
PARP1 binding protein.
   
  
 0.731
LOC114865854
Pro-neuropeptide Y.
    
 0.727
LOC114862916
Isotocin-neurophysin IT 1-like.
   
 
 0.696
LOC114859087
proenkephalin-B-like.
     
 0.694
LOC114857901
Galanin peptides-like.
     
 0.674
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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