Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
LOC114846075RUN domain-containing protein 3A-like. (431 aa)    
Predicted Functional Partners:
ap2s1
Adaptor related protein complex 2 subunit sigma 1.
    
   0.903
LOC114862346
BMP-2-inducible protein kinase-like.
    
   0.898
LOC114852367
AP-2 complex subunit alpha-2.
    
   0.868
ap2m1
Adaptor related protein complex 2 subunit mu 1.
   
   0.855
LOC114863148
AP2-associated protein kinase 1-like.
    
   0.847
LOC114866774
AP2-associated protein kinase 1-like.
    
   0.847
ap2a1
Adaptor related protein complex 2 subunit alpha 1.
    
   0.834
ralbp1
ralA binding protein 1.
    
   0.813
ap1b1
Adaptor related protein complex 1 subunit beta 1.
    
   0.760
LOC114869082
AP-1 complex subunit beta-1.
    
   0.760
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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