STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
elavl4ELAV like RNA binding protein 4. (399 aa)    
Predicted Functional Partners:
tra2b
Transformer 2 beta homolog.
  
 0.685
tra2a
Transformer 2 alpha homolog.
  
 0.676
LOC114849062
Transformer-2 protein homolog alpha-like.
  
 0.673
LOC114846585
RNA binding protein fox-1 homolog 3-like.
  
 0.629
ncl
Nucleolin.
  
0.624
LOC114846385
RNA binding protein fox-1 homolog 3-like.
  
 0.611
pabpc4
poly(A) binding protein cytoplasmic 4.
  
 
0.611
ENSBSLP00000013231
annotation not available
  
 0.610
LOC114865350
Polyadenylate-binding protein 1.
  
 
0.610
LOC114858287
Embryonic polyadenylate-binding protein-like.
  
 
0.610
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.