STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861121Ketosamine-3-kinase-like. (309 aa)    
Predicted Functional Partners:
snx13
Sorting nexin 13.
 
      0.842
tbcd
Tubulin folding cofactor D.
 
  
 0.621
adck1
aarF domain containing kinase 1.
  
  
 0.552
b3gntl1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1.
      
 0.493
ciz1
CDKN1A interacting zinc finger protein 1.
   
  
 0.485
wdr18
WD repeat domain 18.
      
 0.449
vat1l
Vesicle amine transport 1 like.
  
  
 0.427
ENSBSLP00000032813
Cortexin 1.
      
 0.422
gpsm2
G protein signaling modulator 2.
      
 0.420
pold2
DNA polymerase delta 2, accessory subunit.
      
 0.418
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.