Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114859440AMP deaminase 2-like. (827 aa)    
Predicted Functional Partners:
aprt
Adenine phosphoribosyltransferase.
  
 0.984
ADK
Adenosine kinase-like.
   
 0.969
impdh2
Inosine monophosphate dehydrogenase 2.
   
 0.958
LOC114857394
Inosine-5'-monophosphate dehydrogenase 1a-like.
   
 0.956
LOC114862121
Inosine-5'-monophosphate dehydrogenase 1b.
   
 0.956
LOC114864238
Hypoxanthine-guanine phosphoribosyltransferase.
    
 0.956
LOC114856879
Hypoxanthine-guanine phosphoribosyltransferase-like.
    
 0.956
LOC114867563
GMP reductase 2-like.
   
 0.955
LOC114865232
GMP reductase 1.
   
 0.955
adss2
Adenylosuccinate synthase 2.
  
 
 0.947
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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