STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntf3Neurotrophin 3. (305 aa)    
Predicted Functional Partners:
ntrk2
Neurotrophic receptor tyrosine kinase 2.
    
 0.940
ntrk1
Neurotrophic receptor tyrosine kinase 1.
    
 0.940
bdnf
Brain derived neurotrophic factor.
   
 0.876
LOC114856775
NT-3 growth factor receptor-like.
    
 0.837
LOC114866706
BDNF/NT-3 growth factors receptor-like.
    
 0.837
ntrk3
Neurotrophic receptor tyrosine kinase 3.
    
 0.837
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.728
LOC114856065
Ephrin type-A receptor 2-like.
    
 0.720
LOC114859053
Ephrin type-A receptor 2-like.
    
 0.720
LOC114854523
Insulin receptor-like.
    
  0.718
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.