Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC114850169Leucine-rich repeat-containing protein 15-like. (223 aa)    
Predicted Functional Partners:
ENSBSLP00000023057
Glycoprotein IX (platelet).
   
 0.802
ENSBSLP00000022601
Glycoprotein Ib platelet subunit beta.
   
 0.682
f2
Coagulation factor II, thrombin.
   
 0.563
LOC114853976
Leucine-rich repeat-containing protein 30-like.
  
   
 0.536
LOC114866502
Glutamate receptor ionotropic, NMDA 1.
   
 0.511
ENSBSLP00000053914
Leucine rich repeat containing 18a.
  
     0.503
LRRC30
Leucine rich repeat containing 30.
  
   
 0.502
lrrc57
Leucine rich repeat containing 57.
  
     0.500
LOC114861696
Volume-regulated anion channel subunit LRRC8E-like.
  
     0.498
LOC114857029
Carboxypeptidase Z-like.
    
 0.488
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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