Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC114855209Musculoskeletal embryonic nuclear protein 1-like. (78 aa)    
Predicted Functional Partners:
kif19
Kinesin family member 19.
    
 0.605
mst1r
Macrophage stimulating 1 receptor.
    
  0.599
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.599
LOC114856141
Macrophage-stimulating protein receptor-like.
    
  0.599
pag1
Phosphoprotein membrane anchor with glycosphingolipid microdomains 1.
    
  0.580
LOC114858804
Urotensin-2-like.
     
 0.579
plcg1
Phospholipase C gamma 1.
    
 0.575
abhd17b
Abhydrolase domain containing 17B.
    
 
 0.568
LOC114860213
Erythropoietin receptor-like.
    
 0.567
LOC114863917
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2B-like.
    
 0.552
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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