Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC114857669Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein. (414 aa)    
Predicted Functional Partners:
syvn1
Synoviolin 1.
   
 
 0.693
AMFR
Autocrine motility factor receptor.
   
 
 0.684
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.586
LOC114857283
E3 ubiquitin-protein ligase AMFR-like.
   
 
 0.563
LOC114858846
Cyclic AMP-dependent transcription factor ATF-4-like.
   
 
 0.557
edem1
ER degradation enhancing alpha-mannosidase like protein 1.
   
  
 0.510
LOC114862623
dnaJ homolog subfamily B member 9-like.
   
  
 0.507
dnajb9
DnaJ heat shock protein family (Hsp40) member B9.
   
  
 0.507
hspa5
Heat shock protein family A (Hsp70) member 5.
   
 
 0.486
xbp1
X-box binding protein 1.
   
 
 0.484
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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