Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114851323L-amino-acid oxidase-like. (543 aa)    
Predicted Functional Partners:
tat
Tyrosine aminotransferase.
   
 0.934
aspa
Aspartoacylase.
    
  0.916
TYR
Tyrosinase-like.
   
  0.915
tyr
Tyrosinase.
   
  0.915
LOC114867011
S-adenosylmethionine synthase-like.
   
 0.913
LOC114862206
S-adenosylmethionine synthase.
   
 0.913
LOC114866812
S-adenosylmethionine synthase-like.
   
 0.913
LOC114870776
S-adenosylmethionine synthase-like.
   
 0.913
LOC114857330
Eosinophil peroxidase-like.
    
  0.908
LOC114863161
Aspartate aminotransferase, cytoplasmic-like.
    
  0.908
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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