Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861414MORN repeat-containing protein 4-like. (145 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
 0.750
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
   
 
 0.743
morn5
MORN repeat containing 5.
      
 0.676
myo3a
Myosin IIIA.
    
 
 0.674
lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.645
pacrg
Parkin coregulated.
   
 
 0.628
LOC114868516
Rab5 GDP/GTP exchange factor-like.
   
 0.604
LOC114862273
Rab5 GDP/GTP exchange factor-like.
   
 0.604
LOC114869334
Rab5 GDP/GTP exchange factor-like.
   
 0.604
ENSBSLP00000048337
annotation not available
    
   0.537
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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