STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114853947Uncharacterized LOC114853947. (1752 aa)    
Predicted Functional Partners:
LOC114843270
Apoptosis-associated speck-like protein containing a CARD.
   
 0.543
ripk2
Receptor interacting serine/threonine kinase 2.
   
 0.539
REL
REL proto-oncogene, NF-kB subunit.
   
  0.515
LOC114851349
Transcription factor p65-like.
   
  0.515
nek7
NIMA related kinase 7.
    
  0.489
rfx5
Regulatory factor X5.
    
  0.486
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
  0.474
hsp90ab1
Heat shock protein 90 alpha family class B member 1.
    
  0.471
LOC114849323
Heat shock protein HSP 90-alpha 1.
    
  0.471
LOC114848314
Flocculation protein FLO11-like.
    
 0.465
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.