Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bahcc1BAH domain and coiled-coil containing 1. (2716 aa)    
Predicted Functional Partners:
LOC114857973
SIN3-HDAC complex-associated factor-like.
    
   0.962
sap30l
SAP30 like.
    
   0.899
ctu1
Cytosolic thiouridylase subunit 1.
   
   0.859
LOC114852195
SIN3-HDAC complex-associated factor-like.
    
   0.858
ing1
Inhibitor of growth family member 1.
    
 
 0.814
LOC114851763
Histone-binding protein RBBP7.
    
 
 0.797
rbbp4
RB binding protein 4, chromatin remodeling factor.
    
 
 0.797
nsa2
NSA2 ribosome biogenesis factor.
    
   0.683
iqce
IQ motif containing E.
      
 0.659
LOC114854405
Mesoderm induction early response protein 2-like.
    
 
 0.651
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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