Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000012475annotation not available (1017 aa)    
Predicted Functional Partners:
fancm
FA complementation group M.
    
 0.641
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.588
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.482
ENSBSLP00000029314
annotation not available
    
 0.426
rpa2
Replication protein A2.
    
 0.426
LOC114851763
Histone-binding protein RBBP7.
    
 0.425
rbbp4
RB binding protein 4, chromatin remodeling factor.
    
 0.425
LOC114855904
Retinoblastoma-like protein 1.
    
  0.414
LOC114855748
Retinoblastoma-like protein 1.
    
  0.414
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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