STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc12Zinc finger DHHC-type containing 12. (270 aa)    
Predicted Functional Partners:
pot1
Protection of telomeres 1.
    
 0.615
LOC114857554
Uncharacterized LOC114857554.
    
 0.584
rad50
RAD50 double strand break repair protein.
    
 0.532
coq3
Coenzyme Q3, methyltransferase.
     
 0.532
ENSBSLP00000049041
annotation not available
    
 0.498
mre11
MRE11 homolog, double strand break repair nuclease.
    
  0.494
LOC114856226
Golgin subfamily A member 7-like.
    
 0.486
LOC114859091
Golgin subfamily A member 7B-like.
    
 0.486
LOC114845436
Golgin subfamily A member 7.
    
 0.486
golga7b
Golgin A7 family member B.
    
 0.486
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.