Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rergRAS like estrogen regulated growth inhibitor. (200 aa)    
Predicted Functional Partners:
EIF4E3
Eukaryotic translation initiation factor 4E family member 3.
     
 0.753
abhd14b
Abhydrolase domain containing 14B.
   
 
 0.713
med7
Mediator complex subunit 7.
      
 0.705
pdia5
Protein disulfide isomerase family A member 5.
   
 0.701
mettl6
Methyltransferase like 6.
      
 0.698
dusp6
Dual specificity phosphatase 6.
    
 
 0.658
zfat
Zinc finger and AT-hook domain containing.
    
 0.642
LOC114852798
Intersectin-2-like.
    
 0.641
itsn2
Intersectin 2.
    
 0.641
rab23
RAB23, member RAS oncogene family.
    
 0.633
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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