STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114850582HIRA-interacting protein 3-like. (404 aa)    
Predicted Functional Partners:
LOC114863138
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.802
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.723
LOC114852099
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.723
LOC114870748
Cytochrome c oxidase subunit 5B, mitochondrial-like.
   
 0.714
COX5B
Cytochrome c oxidase subunit 5B, mitochondrial-like.
   
 0.714
c24h1orf198
Chromosome 24 C1orf198 homolog.
   
 0.714
LOC114865261
Casein kinase II subunit beta.
    
   0.713
LOC114842474
Casein kinase II subunit beta-like.
    
   0.713
LOC114858202
Cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like.
    
 0.707
LOC114851887
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
    
 0.707
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.