STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000012552annotation not available (1116 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen.
  
 0.741
nthl1
Nth like DNA glycosylase 1.
  
 0.702
mutyh
mutY DNA glycosylase.
   
 0.663
ung
Uracil DNA glycosylase.
  
 0.639
ogg1
8-oxoguanine DNA glycosylase.
   
 0.627
fen1
Flap structure-specific endonuclease 1.
  
 0.571
LOC114844247
Probable flap endonuclease 1 homolog.
  
 0.571
ENSBSLP00000050458
Small nuclear ribonucleoprotein D3 polypeptide, like.
   
 0.569
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.556
ENSBSLP00000048522
Small nuclear ribonucleoprotein polypeptide G.
   
  0.544
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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