STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIMP3Metalloproteinase inhibitor 3-like. (264 aa)    
Predicted Functional Partners:
mmp9
Matrix metallopeptidase 9.
   
 0.966
LOC114868594
Matrix metalloproteinase-20-like.
   
 0.918
LOC114868595
Collagenase 3-like.
   
 0.918
LOC114869183
Collagenase 3-like.
   
 0.918
mmp2
Matrix metallopeptidase 2.
   
 0.918
LOC114849978
Disintegrin and metalloproteinase domain-containing protein 17-like.
    
 
 0.916
adam17
ADAM metallopeptidase domain 17.
    
 
 0.916
MMP1
Stromelysin-2-like.
    
 0.860
mmp15
Matrix metallopeptidase 15.
   
 0.795
LOC114844813
Matrix metalloproteinase-14-like.
   
 0.795
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.