STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114847215Thioredoxin domain-containing protein 3 homolog. (654 aa)    
Predicted Functional Partners:
mrps15
Mitochondrial ribosomal protein S15.
  
 0.988
dnai1
Dynein axonemal intermediate chain 1.
    
 0.987
mrps12
Mitochondrial ribosomal protein S12.
  
 0.982
WDR63
WD repeat domain 63.
    
 0.981
wdr78
WD repeat domain 78.
    
 0.981
mrps10
Mitochondrial ribosomal protein S10.
  
 0.980
prdx5
Peroxiredoxin 5.
   
 0.980
rps23
Ribosomal protein S23.
  
 0.976
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
    
 0.976
wdr34
WD repeat domain 34.
    
 0.976
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.