Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC114853978Gamma-crystallin N-B. (293 aa)    
Predicted Functional Partners:
tsc2
TSC complex subunit 2.
    
 0.951
tsc1
TSC complex subunit 1.
   
 0.943
mtor
Mechanistic target of rapamycin kinase.
    
 0.928
rptor
Regulatory associated protein of MTOR complex 1.
    
 0.884
tpt1
Tumor protein, translationally-controlled 1.
   
 
 0.828
akt1s1
AKT1 substrate 1.
    
 0.819
LOC114870060
Ras-related GTP-binding protein A.
    
 0.805
mlst8
MTOR associated protein, LST8 homolog.
    
 0.780
LOC114869494
Ribosomal protein S6 kinase beta-1-like.
    
 0.763
LOC114868250
Ribosomal protein S6 kinase beta-1-like.
    
 0.763
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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