Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zpld1Zona pellucida like domain containing 1. (411 aa)    
Predicted Functional Partners:
bricd5
BRICHOS domain containing 5.
      
 0.687
LOC114843876-2
Cerebellin-1-like.
      
 0.671
LOC114848129
Otolith matrix protein 1-like.
      
 0.614
GALNT10
Polypeptide N-acetylgalactosaminyltransferase 10.
      
 0.494
skor2
SKI family transcriptional corepressor 2.
      
 0.490
LOC114847060
Glucosidase 2 subunit beta-like.
    
 
 0.482
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
    
 
 0.482
prkcsh
Protein kinase C substrate 80K-H.
    
 
 0.482
LOC114859802
Hemoglobin subunit beta-2-like.
  
     0.455
PCDH20
Protocadherin 20.
      
 0.448
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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