Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
psme3ip1Proteasome activator subunit 3 interacting protein 1. (281 aa)    
Predicted Functional Partners:
ENSBSLP00000027072
Proteasome activator subunit 3.
    
 
 0.980
psma1
Proteasome 20S subunit alpha 1.
    
   0.935
cactin
Cactin, spliceosome C complex subunit.
    
 
 0.916
LOC114848189
Arginine/serine-rich protein 1-like.
    
   0.899
cdc5l
Cell division cycle 5 like.
   
 
 0.889
fam32a
Family with sequence similarity 32 member A.
   
 
 0.887
xab2
XPA binding protein 2.
   
   0.882
prpf8
pre-mRNA processing factor 8.
    
   0.878
LOC114868335
Homeobox protein goosecoid-2-like.
    
   0.869
gsc
Goosecoid homeobox.
    
   0.869
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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